name: sync description: Check for drift between repo and running system. Use when checking if scripts or Samara are out of sync, verifying system integrity, or before/after rebuilds. Trigger words: sync, organism sync, check drift, system drift, repo sync. context: fork allowed-tools:

• Bash
• Read
• Grep

Sync Skill

Check for drift between the repo and running system, and optionally fix it.

What This Does

Runs the sync-organism script to detect differences between:

• ~/Developer/samara-main/ (the repo/genome)
• ~/.claude-mind/ (the running organism)
• /Applications/Samara.app (the built app)

Running the Check

~/.claude-mind/system/bin/sync-organism

What It Checks

1. Samara.app Signing - Correct Team ID (G4XVD3J52J)
2. Skills Symlinks - All skills properly linked from repo
3. Script Drift - Differences between repo and runtime scripts
4. Samara Source - Whether installed app matches source code

When to Use

• After making changes to scripts in either location
• Before/after update-samara rebuilds
• During wake cycles (for monitoring)
• When something "should work but doesn't"

Output Example

## Samara.app Signing
[OK] Samara.app signed with correct Team ID: G4XVD3J52J

## Skills Symlinks
[OK] 10 skills properly symlinked

## Script Drift Analysis
[OK] All shared scripts are identical

## Samara.app Source Check
[OK] Samara.app is up to date with source

SUMMARY
Total drift: 0 issues

Fixing Drift

If drift is detected, the script shows commands to fix it. Common fixes:

• Copy runtime script to repo: cp ~/.claude-mind/system/bin/X ~/Developer/samara-main/scripts/
• Rebuild Samara: ~/.claude-mind/system/bin/update-samara
• Recreate symlinks: Run sync-skills or manually create symlinks