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bio-population-genetics-scikit-allel-analysis

maintained by GPTomics

star 300 account_tree 51 verified_user MIT License
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Overview Implementation Examples History

Python population genetics with scikit-allel. Read VCF files, compute allele frequencies, calculate diversity statistics, perform PCA, and run selection scans using GenotypeArray and HaplotypeArray data structures.

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Skill Details

GitHub Stars 300
GitHub Forks 51
Created Jan 2026
Last Updated 5 months ago
tools tools bioinformatics

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