Variant calling with GATK HaplotypeCaller following best practices. Covers germline SNP/indel calling, GVCF workflow for cohorts, joint genotyping, and variant quality score recalibration (VQSR). Use for production-quality variant calls from WGS/WES data.
Key Features
- Comprehensive skill evaluation and performance tracking
- Community-driven ratings and reviews
- Easy integration with Claude Code
- Regular updates and maintenance
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Skill Details
GitHub Stars
300
GitHub Forks
51
Created
Jan 2026
Last Updated
5 months ago
tools
tools bioinformatics
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