api

cellphonedb

by Ketomihine

star 0

Comprehensive skill for CellPhoneDB - Database of cell type markers and cell-cell communication analysis for single-cell...

api

spatialdata-io-docs-local

by Ketomihine

star 0

SpatialData-IO 空间数据I/O工具包 - 100%覆盖85个核心文件（20个空间平台+6个API+6个CLI+53个生成器文档）

api

archr-local

by Ketomihine

star 0

ArchR docs served from downloaded_docs/archr_scrape - comprehensive scATAC-seq analysis toolkit with all HTML files expl...

api

seurat-local

by Ketomihine

star 0

Seurat 文档本地镜像（Satija Lab docs，包含 seurat/ 子目录与 archive）

api

palantir-docs-local

by Ketomihine

star 0

Palantir 本地文档（en/latest）

api

scvitools-complete

by Ketomihine

star 0

scvi-tools 单细胞深度学习框架 - 100%覆盖文档（完整API+教程+模型训练+多模态整合）

api

giottosuite-local

by Ketomihine

star 0

Giotto Suite 空间转录组学分析工具包 - 100%覆盖718个文件（37个教程+285个核心API+4个数据文档+344个扩展函数+49个工具函数）

api

cellchat-pkg-local-comple...

by Ketomihine

star 0

CellChat 包源码随附的本地教程 + Rd 转换的函数文档 + R 源码 HTML - 完整覆盖173个文件

api

rapids-singlecell-complet...

by Ketomihine

star 0

RAPIDS Single-Cell GPU 文档完整镜像

api

developing-heart-local

by Ketomihine

star 0

Developing Heart Atlas notebooks converted to HTML (local)

api

mudata-complete

by Ketomihine

star 0

MuData 多模态数据分析工具包 - 100%覆盖文档（API+教程+IO指南+核心功能）

api

envi-pkg-local

by Ketomihine

star 0

ENVI 本地文档+教程+源码 - 100%覆盖13个文件（Sphinx build + 手动转换 notebooks/py）

api

sc-best-practices-complet...

by Ketomihine

star 0

单细胞分析最佳实践集合 - 100%完整覆盖（410个文件：407个HTML文档+3个项目文档）

api

liana-py-complete

by Ketomihine

star 0

Liana-py 细胞互作分析工具包 - 100%覆盖文档（60个核心文件+72个图片文件）

api

scglue-complete

by Ketomihine

star 0

scGLUE 单细胞多组学数据整合工具包 - 100%覆盖文档（完整API+教程+数据整合+图谱分析）

api

scanpy-complete

by Ketomihine

star 0

Scanpy 单细胞分析工具包 - 100%覆盖文档（API+教程+预处理+分析+可视化）

api

spatialdata

by Ketomihine

star 0

SpatialData framework for handling spatial multi-modal and multi-scale data. Use this skill for questions about spatial...

api

scarches

by Ketomihine

star 0

Comprehensive skill for scARCHES - Deep learning library for single-cell analysis of chromatin accessibility data. Use f...

api

banksy

by Ketomihine

star 0

BANKSY spatial transcriptomics analysis - comprehensive documentation with notebooks and API

api

organ-axis-complete

by Ketomihine

star 0

Organ Axis tutorial docs - 100%覆盖文档（模型应用+公式+注释采样+教程)

api

sc-best-practices-auto

by Ketomihine

star 0

单细胞分析最佳实践集合——目录索引自动发现，完整抓取HTML/MD与代码块

api

envi-pkg-local-improved

by Ketomihine

star 0

ENVI spatial transcriptomics analysis toolkit - comprehensive documentation with tutorials and Python source code

api

test

by Ketomihine

star 0

HTML documentation test

api

banksy-merged-v3

by Ketomihine

star 0

BANKSY spatial transcriptomics analysis tool - complete documentation with notebooks and source code