OpenClaw

clarity-research

Search protein folding research data from Clarity Protocol. Use when the user asks to search variants, query protein research, find fold results, or explore disease-specific protein data. Capabilities: list variants by disease or protein name, get API info.

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查看来源 ↗安装与使用 SKILL.md ↗

安装与使用

请根据来源仓库和你的 AI 工具说明安装此技能。先阅读技能文件和依赖要求，再添加到工作流。

SkillHub CLI

skillhub install clarityprotocol/clarity-research

打开来源仓库，查看说明和兼容环境后，按来源提供的命令或步骤安装。

将来源链接提供给你的 Agent，让它先读取说明、核对依赖，并向你说明将执行的安装步骤。

查看来源 ↗使用指南

技能说明

Clarity Research Skill

Search protein folding research data from Clarity Protocol, a community-driven platform for protein mutation analysis using AlphaFold2 via ColabFold.

Quick Start

List all available variants:

python scripts/query_variants.py

Filter by disease:

python scripts/query_variants.py --disease Alzheimer

Filter by protein name:

python scripts/query_variants.py --protein-name MAPT

Output Fields

Each variant result includes:

id: Unique fold identifier
protein_name: Protein name (e.g., "tau", "APP")
variant: Mutation notation (e.g., "P301L", "A246E")
disease: Associated disease
uniprot_id: UniProt database identifier
average_confidence: AlphaFold confidence score (0-100)
created_at: When the fold was created

Rate Limits

Anonymous (no API key): 10 requests/minute
With API key: 100 requests/minute

To use an API key, set the CLARITY_API_KEY environment variable:

export CLARITY_API_KEY=your_key_here
python scripts/query_variants.py

Get your API key at https://clarityprotocol.io

Error Handling

404 Not Found: The endpoint or resource does not exist.

429 Rate Limit: You've exceeded the rate limit. The script will display how long to wait before retrying.

500 Server Error: The API server encountered an error. Try again later.

Timeout: The request took longer than 30 seconds. The server may be under heavy load.

Pagination

Results are paginated. The API returns a next_cursor field if more results are available. The script automatically handles pagination for typical queries.

Use Cases

Explore available protein variants for a specific disease
Find all folded mutations for a particular protein
Get an overview of research data available in Clarity Protocol
Identify fold IDs for detailed analysis with other skills

来源信息

Source: github
Repository: openclaw/skills
Path: skills/clarityprotocol/clarity-research
Version: —
Commit: 8a73dc784e19b04d6699e096687960f8c7317177
分类来源: rules
状态: active
可见性: public

这些信息来自收录时的来源分析，可能滞后；使用前请核对最新来源文件。

来源内容

SKILL.md

# Clarity Research Skill

Search protein folding research data from Clarity Protocol, a community-driven platform for protein mutation analysis using AlphaFold2 via ColabFold.

## Quick Start

List all available variants:

```bash
python scripts/query_variants.py
```

Filter by disease:

```bash
python scripts/query_variants.py --disease Alzheimer
```

Filter by protein name:

```bash
python scripts/query_variants.py --protein-name MAPT
```

## Output Fields

Each variant result includes:

- `id`: Unique fold identifier
- `protein_name`: Protein name (e.g., "tau", "APP")
- `variant`: Mutation notation (e.g., "P301L", "A246E")
- `disease`: Associated disease
- `uniprot_id`: UniProt database identifier
- `average_confidence`: AlphaFold confidence score (0-100)
- `created_at`: When the fold was created

## Rate Limits

- **Anonymous (no API key)**: 10 requests/minute
- **With API key**: 100 requests/minute

To use an API key, set the `CLARITY_API_KEY` environment variable:

```bash
export CLARITY_API_KEY=your_key_here
python scripts/query_variants.py
```

Get your API key at https://clarityprotocol.io

## Error Handling

**404 Not Found**: The endpoint or resource does not exist.

**429 Rate Limit**: You've exceeded the rate limit. The script will display how long to wait before retrying.

**500 Server Error**: The API server encountered an error. Try again later.

**Timeout**: The request took longer than 30 seconds. The server may be under heavy load.

## Pagination

Results are paginated. The API returns a `next_cursor` field if more results are available. The script automatically handles pagination for typical queries.

## Use Cases

- Explore available protein variants for a specific disease
- Find all folded mutations for a particular protein
- Get an overview of research data available in Clarity Protocol
- Identify fold IDs for detailed analysis with other skills

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