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bio-spatial-transcriptomics-spatial-data-io

maintained by GPTomics

star 300 account_tree 51 verified_user MIT License
bolt View GitHub
Overview Implementation Examples History

Load spatial transcriptomics data from Visium, Xenium, MERFISH, Slide-seq, and other platforms using Squidpy and SpatialData. Read Space Ranger outputs, convert formats, and access spatial coordinates.

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Quick Start

TopRank Skills install GPTomics/spatial-data-io

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Skill Details

GitHub Stars 300
GitHub Forks 51
Created Jan 2026
Last Updated 5 months ago
tools tools bioinformatics

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