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bio-read-qc-contamination-screening

maintained by GPTomics

star 299 account_tree 51 verified_user MIT License
bolt View GitHub

Detect sample contamination and cross-species reads using FastQ Screen. Screen reads against multiple reference genomes to identify bacterial, viral, adapter, or sample swap contamination. Use when suspecting cross-contamination or working with samples prone to microbial contamination.

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Skill Details

GitHub Stars 299
GitHub Forks 51
Created Jan 2026
Last Updated 5个月前
tools tools bioinformatics

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