80,000+ Skills to Supercharge Claude
The open directory for GitHub-integrated capabilities, tools, and prompts for your AI workflows.
alphafold-database
by K-Dense-AI
Access AlphaFold 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, ana...
citation-management
by K-Dense-AI
Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate m...
torchdrug
by K-Dense-AI
PyTorch-native graph neural networks for molecules and proteins. Use when building custom GNN architectures for drug dis...
fda-database
by K-Dense-AI
Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identificat...
ensembl-database
by K-Dense-AI
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative...
scientific-critical-think...
by K-Dense-AI
Evaluate scientific claims and evidence quality. Use for assessing experimental design validity, identifying biases and...
scientific-writing
by K-Dense-AI
Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points)...
gwas-database
by K-Dense-AI
Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-value...
clinvar-database
by K-Dense-AI
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications,...
scikit-bio
by K-Dense-AI
Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ord...
geopandas
by K-Dense-AI
Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when wor...
protocolsio-integration
by K-Dense-AI
Integration with protocols.io API for managing scientific protocols. This skill should be used when working with protoco...
etetoolkit
by K-Dense-AI
Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI...
gtars
by K-Dense-AI
High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regio...
pptx-posters
by K-Dense-AI
Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly...
pydeseq2
by K-Dense-AI
Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR corre...
plotly
by K-Dense-AI
Interactive visualization library. Use when you need hover info, zoom, pan, or web-embeddable charts. Best for dashboard...
scientific-brainstorming
by K-Dense-AI
Creative research ideation and exploration. Use for open-ended brainstorming sessions, exploring interdisciplinary conne...
pennylane
by K-Dense-AI
Hardware-agnostic quantum ML framework with automatic differentiation. Use when training quantum circuits via gradients,...
simpy
by K-Dense-AI
Process-based discrete-event simulation framework in Python. Use this skill when building simulations of systems with pr...
pytdc
by K-Dense-AI
Therapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits, molecula...
labarchive-integration
by K-Dense-AI
Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with...
anndata
by K-Dense-AI
Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the...
latchbio-integration
by K-Dense-AI
Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy serverle...