GitHub
data-stats-analysis
Perform statistical tests, hypothesis testing, correlation analysis, and multiple testing corrections using scipy and statsmodels. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
☆ 834View skill
Search results for “Claude”
Skills matching the name, description or GitHub author.
Categories: databases bioinformatics
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string-protein-interaction-analysis-with-omicverse
Help Claude query STRING for protein interactions, build PPI graphs with pyPPI, and render styled network figures for bulk gene lists.
☆ 834View skill
GitHub
bulk-rna-seq-differential-expression-with-omicverse
Guide Claude through omicverse's bulk RNA-seq DEG pipeline, from gene ID mapping and DESeq2 normalization to statistical testing, visualization, and pathway enrichment. Use when a user has bulk count matrices a...
☆ 834View skill
GitHub
bulk-rna-seq-deseq2-analysis-with-omicverse
Walk Claude through PyDESeq2-based differential expression, including ID mapping, DE testing, fold-change thresholding, and enrichment visualisation.
☆ 834View skill
GitHub
tcga-bulk-data-preprocessing-with-omicverse
Guide Claude through ingesting TCGA sample sheets, expression archives, and clinical carts into omicverse, initialising survival metadata, and exporting annotated AnnData files.
☆ 834View skill
GitHub
bulk-wgcna-analysis-with-omicverse
Assist Claude in running PyWGCNA through omicverse—preprocessing expression matrices, constructing co-expression modules, visualising eigengenes, and extracting hub genes.
☆ 834View skill
GitHub
single-cell-clustering-and-batch-correction-with-omicverse
Guide Claude through omicverse's single-cell clustering workflow, covering preprocessing, QC, multimethod clustering, topic modeling, cNMF, and cross-batch integration as demonstrated in t_cluster.ipynb and t_s...
☆ 834View skill
GitHub
single-cell-annotation-skills-with-omicverse
Guide Claude through SCSA, MetaTiME, CellVote, CellMatch, GPTAnno, and weighted KNN transfer workflows for annotating single-cell modalities.
☆ 834View skill
GitHub
claude-scientific-skills
Comprehensive collection of 128+ ready-to-use scientific skills for Claude enabling research across biology, chemistry, medicine, genomics, and advanced analysis domains.
☆ 129View skill
GitHub
braindance-worlds
GF(3)-conserved distribution of Claude threads across Aptos worlds
☆ 5View skill
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